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The AlignMe server creates alignments of membrane proteins and proteins that share hardly any sequence similarity but are related nonetheless.

Protein Prompt

The ProteinPrompt server predicts protein-protein interactions (PPIs). For a given query sequence a list of potential binders from a provided database are returned.


MDsrv is a web-based tool developed to enhance collaborative research by providing non-experts with easy and quick on-line access to molecular dynamics (MD) simulations.


Voronoia is a database storing data on atomic packing densities of RNA structures and complexes. Compared to other methods, that solely estimate van der Waals interactions i.e. by gain of solvent excluded surfaces, Voronoia4RNA allocates the free space between neighbouring atoms. It explicitly takes packing defects into consideration and is therefore an appropriate method to calculate van der Waals interactions and to estimate the underlying forces.